←BACK

Research Article

 

Frequency and Susceptibility Pattern of Extended Spectrum Beta Lactamase Producing Aerobic Gram Negative Bacteria in Post-Operative Infections

 

Muhammad Bilal Habib 1*, Noreen Sher Akbar 2

 

1 College of Medical Laboratory Technology National Institute of Health Islamabad Pakistan 44000.

2 DBS&H CEME National University of Sciences and Technology, Islamabad, Pakistan.

 

* Corresponding author. E-mail: bilalhabib62@gmail.com

 

Received: Aug. 18, 2018; Accepted: Mar. 28, 2019; Published: May 16, 2019

 

Citation: Muhammad Bilal Habib, Noreen Sher Akbar, Frequency and Susceptibility Pattern of Extended Spectrum Beta Lactamase Producing Aerobic Gram Negative Bacteria in Post-Operative Infections. Nano Biomed. Eng., 2019, 10(2): 138-149.

DOI: 10.5101/nbe.v10i2.p138-149.

 

Abstract

Extended spectrum β-lactamases occur commonly in the aerobic Gram negative bacteria (AGNB) such as E. coli, Klebsiella spp., Proteus spp., Pseudomonas aeruginosa, Acinetobacter spp., etc. and have the ability to make these organisms resistant to cephalosporins  (e.g. ceftazidime, ceftriaxone, cefotaxime etc.), penicillins, and monobactams, i.e. aztreonam. However theses antibiotics become sensitive in the presence of clavulanic acid, an extended spectrum beta-lactamase (ESBL) inhibitor. ESBL enzymes do not influence cephamycins or carbapenems, i.e. meropenem, imipenem, etc. Major problems in surgery is wound infections after operations. High risks of wound infections are due to being immune-comprised on antibiotics, prolonged hospitalization and other factors in many cases. The current research determined various aerobic gram negative bacteria in post-operative wound infections at the College of Medical Laboratory Technology, the National Institute of Health, Islamabad, Pakistan. It also determined the frequency of ESBL in the organisms and established their susceptibility profile during the time period of the research. Infections caused by ESBL producers are a major problem in our post-operative patients. The commonest isolate was E. coli and the commonest ESBL producer was Klebsiella spp. Double disk synergy test is an effective method for screening of such isolates, and the practice of incorporating this test along with the routine sensitivity is recommended.

 

Keywords: Extended spectrum beta lactamase (ESBL); Antimicrobial sensitivity pattern (ASP); Double disk synergy test (DDST)

 

Introduction

Extended-spectrum β-lactamase (ESBL) produced by gram negative bacteria Escherichia coli (E. coli) and Klebsiella species (Klebsiella spp.) [1]. The incidence of extended spectrum beta lactamase-Escherichia coli (ESBL-EC) infection has increased in community hospitals throughout the Southeastern United States [2]. ESBLs are mostly plasmid-mediated beta lactamases (β-lactamases) that efficiently hydrolyze oxyimino-cephalosporins and monobactams, yet are inhibited by β-lactamase inhibitors [6]. The introduction of third generation of cephalosporin’s in 1980’s was a breakthrough in the fight against β-lactamases producing bacterial resistance towards antibiotics. The β-lactamase enzymes produced by the organisms act by hydrolyzing the beta lactam ring of b-lactam antimicrobials [8]. Theses enzymes are first discovered in Germany in 1983 from Klebsiellae pneumonia and they are group of enzymes that can even hydrolyze the third generation oxyimino-cephalosporins such as (cefotaxime, ceftazidime, ceftriaxone), the monobactams (aztreonam) but not the cephamycins (cefoxitin, cefotetan) or carbapenems (imipenem, meropenem) etc. [8, 9, 10, 22]. Antibiotic resistance among bacteria is a most prevalent issue worldwide both in hospital settings and in the community. β-lactamases production by various gram negative isolates is perhaps resistance mechanism towards b-lactam agents. Major risk factors are prolong exposure to antibiotics, long-term hospital stay, severe illness, resistance with third generation of cephalosporins, intubation and catheterization [10]. There are many risks for wound infections. Most hospital acquired infections (HAIs) arise from surgical wounds, improper hand washing, incomplete sterilization and air vents. In the field of surgery, post-operative wound infections is a major problem. Small plasmids are present in some resistant strains of E. coli that are responsible for the production of enzymes such as TEM-1 which acts as beta lactamases, that make it resistant to amoxicillin/clavulanic acid.  Past studies shows that resistance against organisms in post operative wound infections are increasing [15]. ESBLs producing organisms are clinically relevant and are resistant with cephalosporins [22]. According to Centers for Disease Control and Prevention (CDC), by careful techniques 33% of wound infections can be prevented [26]. The main reason of infections in post-operative infections is bad healthcare practices in hospitals, no proper care of wounds, unsterilized instruments are used in surgical procedures and sometimes extensive use of antibiotics in treatment that predispose in resistance of microbes. Members of Enterobacteriaceae produce ESBLs, and are responsible for nosocomial infections [29]. ESBLs producing organisms are Klebsiella pneumoniae and E. coli. Less common members of Enterobacteriaceae and Pseudomonas spp. are also well known for ESBL production. ESBLs Gram negative bacteria have become a challenge in hospitals as well as community acquired infections caused by these organisms [36]. In the USA, 14 to 16% infections are hospital acquired in post operative wound infections, and 77% deaths occur due to surgical wound infection. Production of β-lactamase, can be detected by various molecular testing methods are gold standard but technically difficult to handle and lack facilities. For confirmation of ESBLs, CLSI recommends DDST using disk containing third generation cephalosprins with and without clavulanic acid [41]. In this study we determined various aerobic Gram-negative bacteria in post-operative wound infections at Islamabad Pakistan. We also determine the frequency of ESBL producing aerobic gram-negative bacteria isolated during this time and establish the susceptibility profile of these isolates.

 

Experimental

This study was descriptive and undertaken from January 2017 to February 2018. The research study was carried out in the Microbiology Department of College of Medical Laboratory Technology, National Institute of Health Islamabad. A total of 200 samples were processed. Non-probability random sampling technique was followed. All samples from post-operative patients were included irrespective of age and sex. All samples other than post-operative patients were excluded. All Gram positive isolates after identification were excluded. In all procedures, surgical masks, surgical gloves, and lab coat were used to prevent any sort of serious infections.

 

Sample processing

Samples were collected from patients and cultured on blood agar and MacConkey’s agar plates and then incubated at 37 oC for 24 h. Then, Gram staining and biochemical tests were done for identification. Antimicrobial sensitivity test was carried out by Kirby-Bauer disc diffusion method.

 

Identification of isolates

Identification of aerobic Gram negative bacteria Acinetobacter spp., E. coli, Klebsiella spp., Pseudomonas aeruginosa, and Proteus spp. was performed by using different tests like Gram staining and biochemical tests. E. coli was considered as pathogenic micro-organism, and bio-safety level 2 was used during handling the samples, in which safety cabinet was used.

 

Preservation of isolates

Isolates were preserved on the nutrient agar slants. Pure growth of pathogen was inoculated on blood agar. After overnight incubation, well isolated colonies were taken and were inoculated on the slants. These slants were incubated overnight at 36 ± 1 oC. Then these slants were placed at 4 oC.

 

Gram staining

Clean grease free slides were purchased from market and slides susceptible as greasy were cleaned by washing with hot water and soap, after which the slides were rinsed with distilled water and the excess water was blotted out with blotting paper or with lint-free cloth. With the help of an inoculating needle, a bacterial colony was placed on the drop of distilled water that was placed on the slide, making a smear and fixing it on Bunsen burner flame. Crystal violet was applied for 1 min and was washed with distilled water. Lugol’s iodine solution (mordant) was applied for about 1 min, and then slides were washed with distilled water. Decolorizer was applied for 30 sec and then washed off the slide. Finally, safranin solution (counter stain) was applied on the slide and left for about 1 min, washed off with distilled water, and the smear was dried in air and examined under light microscope [17].

 

Quality control

On the same slide, known Gram positive and Gram negative smears were also stained with test organisms.

 

Biochemical tests

Following biochemical test, isolation and confirmation of aerobic gram negative bacterial colonies were performed.

 

Indole production test

The indole test was performed by growing the isolates in 10 mL sterile Tryptone water for 24 h at 37 °C; then, Kovacs’ reagent (0.5 mL) was added to the culture. After 1 minute, the test tube was examine, and appearance of a red layer in the medium indicated positive results [17].

 

The methyl red-Voges Proskauer (MR-VP) test

The methyl red (MR) test was done by inoculating the isolate into a labeled methyl red-Voges Proskauer (MR-VP) broth by means of a sterile loop. The test tubes were then incubated at 37 oC for 72 h. After incubation, the content of each tube was divided into two equal portions; one of which was used for the methyl red (MR) test and the other for the Voges-Proskauer (VP) test. Two drops of methyl red indicator were added to the portion meant for MR test. Appearance of red color in the medium was recorded as a positive reaction. Barrett’s method was employed in the VP test. 0.6 mL of α-naphthol and 0.2 mL of 40% potassium hydroxide solutions were added to the second portion designated for VP test. The appearance of red color denoted a positive test [17].

 

Citrate utilization test

Using a straight platinum wire, the isolate was inoculated into Koser’s citrate medium and incubated at 37 °C for 48 h. Citrate utilization was denoted by turbidity and color change in the medium from light green to blue. Citrate negative cultures showed neither growth nor color change in the medium [7]. Positive control was Klebsiellae pneumoniae and negative control was E. coli ATCC 25922 [12].

 

Oxidase test

The test organism was taken from the nutrient agar plate with sterile glass rod and smeared across the surface of filter paper on reagent, Appearance of dark purple color within 10 sec was taken as positive test [12].

 

Biochemical identification Gram negative rods using API 20E (Biomeriuex, France)

API 20E is a standardized identification system for Enterobacteriaceae and other Gram negative rods. It has 20 miniaturized biochemical tests. A strip contains 20 micro tubes containing dehydrated substrates (Fig 1). These tests were inoculated with bacterial suspension. After incubation for18 to 24 h at 35 ± 2 oC, reagents were added in respective wells, positive results were noted, and seven-digit numerical profile was determined which was looked up in Analytical Profile Index for a code equivalent to organism identification.

 

Other tests include -galactosidase test; arginine dihydrolase (ADH) test; lysine decarboxylase (LDC) test; ornithine decarboxylase (ODC) test; citrate utilization test; H2S production test; urea test; indole production test; voges Proskauer (VP) test; and gelatin hydrolysis test.

 

D:\xwu\Nano Biomedicine and Engineering\Articles for production\排版\11(2)\[4] NBE-2018-0085 In production 20190516\138-149\mbht1.jpg

Fig. 1 API 20E strip used for identification of different micro-organisms belonging to the Enterobacteriaceae group. It was based on biochemical tests that shows changes in color on fermentation of different sugars and enzymes which indicate production of urease, indole, citrate, maltose, lactose, and fructose produced by different micro-organisms.

 

Table 1 Interpretation of biochemical tests on API 20E strip

Test

Active ingredients

Reactions / Enzymes

Result

 

 

 

Negative

Positive

ONPG

 

2-nitrophenyl-β D-galactopyranoside

beta-galactosidase

Colorless

Yellow

ADH

L-arginine

Arginine dihydrolase

Yellow

Red / Orange

LDC

L-lysine

Lysine decarboxylase

Yellow

Red /Orange

ODC

L-ornithine

Ornithine decarboxylase

Yellow

Red / Orange

CIT

Trisodium citrate

Citrate utilization

Pale green/yellow

Blue-green / Blue

H2S

Sodium thiosulfate

H2S production

Colorless

Black deposit / Thin line

URE

Urea

Urease

Yellow

Red / Orange

TDA

L-tryptophane

Tryptophane deaminase

 

Yellow

TDA / Immediate (1)

Reddish brown

IND

L-tryptophane

Indole production

 

Colorless

Jammes / Immediate (2)

Pink

VP

Sodium pyruvate

Acetoin production

 

Colorless

Vp1+Vp / 10 min (3)

Pink / Red

GEL

Gelatin

Gelatinase

No diffusion

Diffusion of black pigment

GLU

D-glucose

F/O (4), glucose

Blue-green/blue

Yellow

MAN

D-mannitol

F/O, mannitol

Blue-green/blue

Yellow

INO

Inositol

F/O, inositol

Blue-green/blue

Yellow

SOR

D-sorbitol

F/O, sorbitol

Blue-green/blue

Yellow

RHA

L-rhamnose

F/O, rhamnose

Blue-green/blue

Yellow

SAC

D-sucrose

F/O, saccharose

Blue-green/blue

Yellow

MEL

D-melibiose

F/O ,melibiose

Blue-green/blue

Yellow

AMY

Amygdalin

F/O, amygdalin

Blue-green/blue

Yellow

ARA

L-arabinose

F/O,arabinose

Blue-green/blue

Yellow

Note: (1), (2), and (3) refer to reagents added after incubation and time to note the results. (4) refers to fermentation / oxidation reaction.

 

Antibiotic sensitivity test

Kirby-Bauer disc diffusion method was used according to CLSI 2011 guidelines, for identification of isolates for amikacin (AK), ciprofloxacin (CIP), cefepime (FEP), amoxicillin-clavulanic acid (AMC), imipenem (IPM), levofloxacin (LEV), piperacillin-tazobactam (TZP) and ceftazidime (CAZ), ceftriaxone (CRO). Tops of 2 to 3 similar colonies were touched and emulsified in 4 mL of sterile peptone water to achieve a 0.5 Mac F standard. Using sterile swab, suspension was inoculated on the surface of Mueller Hinton agar (Oxoid, Basingstoke, UK) with the petri dish lid in place; about 10 minutes were allowed for the surface of the agar to dry. Antibiotic discs were placed on the surface of agar medium. After incubation at 37 °C for 18 h, the diameter of the zones of inhibition were measured in millimeter.

 

Extended spectrum β-lactamase (ESBLs) production

Screening of ESBLs was done by using disks of amoxicillin-clavulanic acid. Ceftazidime 30µg, ceftriaxone and discs were placed around a disc containing clavulanic acid (in this case amoxicillin/clavulanic acid disk) with a proximity of 25 mm center to center, when the inhibition zone around any of the applied disks was enhanced towards amoxicillin/clavulanic acid disk, forming a characteristically shaped zone referred as a “keyhole,” or “belling”, and it was the indication of ESBLs.

 

Quality control organism

The following organisms were used as control strains in the study.

Escherichia coli ATCC   25922; and

Pseudomonas aeruginosa ATCC   27853

 

Data analysis

Microsoft Excel & MS-Word were used for the graphical representation of data.

 

Results and Discussion

The current study was carried out at the Department of Microbiology, College of Medical Laboratory Technology, National Institute of Health Islamabad from January 2017 to February 2018 to look for the presence of ESBL producing aerobic Gram negative bacteria (AGNBs) isolated from post-operative infections in surgical wounds. 200 pus samples were collected from post-operative infections like appendectomy, cholecystectomy, laparotomy, trauma, mastectomy, thyroidectomy, etc. (Fig. 2). All surgical areas of hospital were included, i.e. surgical wards, outpatient departments (OPDs) and intensive care units (ICUs). Out of the 200 samples, 116 samples yielded AGNB. Thus, 150 organisms were isolated from 116 patients (Fig. 3, Table 2). Out of these 150 organisms, 101 were derived from males and 49 were from females (Fig. 4, Table 3). Out of the 150 organisms, 94 were from inpatients, 49 from outpatients and 7 organisms were isolated from the surgical intensive care unit (SICU) (Table 4). Fig. 6 and Table 5 show the percentages of organisms. E. coli was the commonest organism, i.e. 43/150, followed by Pseudomonas aeruginosa 40/150, Klebsiella spp. 36/150, Acinetobacter spp. 17/150, and Proteus spp. 14/150. As already indicated, 84 samples did not yield any growth. Fig. 7 and Table 6 show that out of the 150 organisms, the best sensitivity result of 81% was shown by imipenem, 78% sensitivity by polymyxin B, 74% by amikacin, and 46% by cefoperazone-sulbactam. All other isolates showed sensitivity of less than 36%. Only 7% sensitivity was shown by AMC. Individual details of the susceptibility pattern are also presented. Table 7 shows that a large number of the 150 isolates were part of a polymicrobial growth. 87 samples yielded single growth, while 63 yielded polymicrobial growth. Among the polymicrobial growths, 25 samples showed 2 organisms, 3 samples showed 3 organisms, while 1 sample yielded four organisms. Fig. 8 shows that out of the 29 samples yielding polymicrobial growths, 16 samples with double growth were isolated from inpatients, 11 from outpatients, and only 2 samples were from SICU. Overall location wise distribution of polymicrobial growths is simplified in Table 8. Table 9 shows the complete data regarding polymicrobial growths, i.e. organisms isolated and ESBL production, according to patient location as given in Table 8. From this table, it could be seen that the commonest combination of organisms was Pseudomonas aeruginosa with Klebsiella pneumoniae 7 (24%); and Klebsiella pneumoniae with E. coli 7 (24%). Details of polymicrobial growth and ESBL production in polymicrobial growth are also presented. The double disk synergy test (DDST) identified ESBL production in 49% of the total 150 isolates. Of these 74 ESBL producers, 64% were derived from male patients and 36% from female patients (Fig. 9, Table 10). Fig. 10 and Table 11 show the distribution among the AGNBs isolated. 74 organisms (49%) were ESBL producers. The organisms included Acinetobacter spp., E. coli, Klebsiella pneumoniae, Pseudomonas aeruginosa, and Proteous spp. The highest ESBL production was shown by Klebsiella pneumoniae as of 34 (46%), and by E. coli as of 31(42%), respectively, followed by Proteus spp. (8%), Acinetobacter spp. (3%) and Pseudomonas aeruginosa (1%). Table 12 shows that the maximum rate of ESBL positivity was seen in inpatients (57%) followed by the surgical OPD (39%). Only 4% ESBL production was seen in the SICU. The most effective antimicrobial in ESBL producers was imipenem (82%) followed by amikacin (55%) and polymyxin B (50%), respectively. Piperacillin-tazobactam showed 47% of sensitivity, while cefoperazone-sulbactam showed 46%. Cefepime was least sensitive at 3% (Fig. 12, Table 13). Table 14 shows the complete susceptibility pattern of ESBL producers. In the present study, all 74 ESBL producers showed resistance to amoxicillin-clavulanic acid, ceftazidime and ceftriaxone. They showed variable resistance to ciprofloxacin, levofloxacin and amikacin. The emergence of antibiotic resistance bacteria is threatening the effectiveness of many antimicrobial agents, which has increased in the hospitalized patients and in turn caused great increase in the economic burden. The current study was conducted in hospital situated in Islamabad, It is a 2000-bed tertiary care institute located in Islamabad. There are 6 surgical units taking care of 240 inpatients, and thus there is a large turnover rate. Post-operative wound infections are a common problem here as in any other large surgical departments. In this study, we found different types of AGNBs involved in post-operative surgical infections and their susceptibility patterns, and also determined the incidence of ESBL production in these organisms. Patients with post-operative infections admitted or attending OPD during the period from January 2017 to February 2018 were included. In our study, the maximal number of patients was male (67%). The male predominance of infection in post-operative patients is also seen in studies conducted by many other authors. Accoring to Colodner et al. [14] and Motayo et al. [31], it may be due to the general finding that male patients have a greater susceptibility to infections. And apart from that, in our society, men are more involved in outdoor activities as compared to women; thus, chances of infections or injuries are more likely in male patients. In our study, the maximal number of isolates was derived from inpatients (62%), which could be due to nosocomial infections that are very common in OPD and SICU. The patients on high dosage of antibiotics and have prosthetic implants are more susceptible to infections. In our study, this was acquired because there were fewer patients from SICU. A similar finding was demonstrated by to Colodner et al. [14] and Motayo et al. [31]. In our study, the commonest organism isolated was E. coli (29%), followed by Pseudomonas aeruginosa (27%), Klebsiella spp. (24%), Acinetobacter spp. (11%) and Proteus spp. (9%). Similar results were observed in developing countries by Anvikar et al. [5] who documented that Klebsiella pneumoniae was the commonest bacteria isolated from general surgical wounds. The difference could be due to different geographical distributions and climates. These isolates are normal flora in hospital environment, and the nosocomial spread might be due to poor adhering of aseptic procedures. The high resistance to amoxicillin/clavulanic acid in our study (i.e 100%) was relatively higher than previous data from studies conducted by Blomberg et al. [7], Lyamuya et al. [25] and Moyo et al. [33]. Resistance to ciprofloxacin is an early warning sign since fluoroquinolones are effective agents for treatment of Gram negative bacterial infections. Therefore, the use of these drugs in treatment of surgical site infections should be closely monitored. The predominant ESBL producer in our case was Klebsiella pneumoniae followed by E. coli. This result is similar to the study done by Zaman et al. [44] and many others. In Pakistan, the highest frequency of ESBL production reported was by Klebsiella sp. followed by E. coli. The SENTRY surveillance programme form Asia Pacific and South Africa reported the commonest ESBL producer was Klebsiella spp. [15]. In our study, ESBL production was also seen in the case of Pseudomonas aeruginosa, but it was much lower as compared to Enterobacteriaceae. Similar findings were given by Nathisuwan et al. [34. It is an established fact that ESBL producers show cross resistance to other antimicrobial agents, and thus limit the therapeutic choice. In our study, the highest sensitivity towards ESBL producers was imipenem (82%) followed by amikacin (55%) and polymyxin B (50%). Our result for imipenem is similar to other studies [15, 20, 22, 35, 41, 43]. But the poor performance as observed in the case of polymyxin B was surprising; better results might have been achieved if MIC testing should be conducted for polymyxin B. The findings of the present study highlight the problem of ESBLs among post-operative infections. Major risk factors for the existence of ESBLs among post-operative infections at hospital include the use of unsterilized instruments, long term exposure to beta lactamase antibiotics especially the third and fourth generations of cephalosporins, and prolonged hospital stay.

 

D:\xwu\Nano Biomedicine and Engineering\Articles for production\排版\11(2)\[4] NBE-2018-0085 In production 20190516\138-149\mbht2.jpg

Fig. 2 Overall distribution of surgical procedures in patients from whom samples were collected (n = 116).

 

D:\xwu\Nano Biomedicine and Engineering\Articles for production\排版\11(2)\[4] NBE-2018-0085 In production 20190516\138-149\mbht3.jpg

Fig. 3 Sample distribution. Total number of isolates: 43%; no growth: 24%; patients with positive results: 33%.

 

Table 2 Sample distribution

Total samples

200

No growths

84

Growth positive patients

116

Total no of isolates

150

 

D:\xwu\Nano Biomedicine and Engineering\Articles for production\排版\11(2)\[4] NBE-2018-0085 In production 20190516\138-149\mbht4.jpg

Fig. 4 Distribution of isolates according to gender. 67% patients were male and 33% were female from whom samples were collected.

 

Table 3 Distribution of isolates according to gender

Gender

Total number of isolates

Male

101 (67%)

Female

49 (33%)

Total

150 (100%)

 

D:\xwu\Nano Biomedicine and Engineering\Articles for production\排版\11(2)\[4] NBE-2018-0085 In production 20190516\138-149\mbht5.jpg

Fig. 5  Distribution of patients according to their location in different wards, including inpatient department (IPD), outpatient department (OPD), and surgical intensive care unit (SICU) department.

 

Table 4 Distribution of isolates according to patient location

Wards

Number of isolates

(n = 150)

IPD

94 (62%)

OPD

49 (33%)

SICU

7 (5%)

Total

150 (100%)

 

D:\xwu\Nano Biomedicine and Engineering\Articles for production\排版\11(2)\[4] NBE-2018-0085 In production 20190516\138-149\mbht6.jpg

Fig. 6 Prevalence of different micro-organisms in isolates. Acinetobacter spp.: 11%, E. coli: 29%, Pseudomonas aeruginosa: 27%, Klebsiella pneumonia: 24%, and Proteus spp.: 9%.

 

Table 5 Organism identified overall

Organisms

Number of isolates

(n = 150)

Acinetobacter spp.

17 (11%)

E. coli

43 (29%)

Klebsiella pneumoniae

36 (24%)

Pseudomonas aeruginosa

40 (27%)

Proteus spp.

14 (09%)

Total

150 (100%)

 

D:\xwu\Nano Biomedicine and Engineering\Articles for production\排版\11(2)\[4] NBE-2018-0085 In production 20190516\138-149\mbht7.jpg

Fig. 7 Overall sensitivity pattern of different micro-organisms from different antimicrobial drugs. Ciprofloxacin was a highly resistant drug, and polymyxine B was a highly sensitive drug as compared to others.

 

Table 6 Overall sensitivity pattern

Antibiotics

Sensitive

Intermediate

Resistant

 

Amikacin (AK) (147)

 

(109) 74%

 

(7) 5%

 

(31) 21%

Amoxicillin-clavulanic acid (AMC) (114)

 

(8) 7%

 

(15) 13%

 

(91) 80%

Cefoperazone-sulbactam  (SCF) (140)

(64) 46 %

(5) 3%

(71) 51%

Cefepime(FEP) (72)

 

(26) 36%

 

(9) 13%

 

(37) 51%

 

Ceftazidime (CAZ) (150)

 

(24) 16%

 

(4) 2%

 

(122) 81%

 

Ceftriaxone (CRO) (149)

 

(34) 23%

 

(10) 7%

 

(105) 70%

 

Ciprofloxacin (CIP) (83)

 

(6) 7%

 

(2) 2%

 

(75) 90%

 

Imipenem (IPM) (150)

 

(121) 81%

 

(6) 4%

 

(23) 15%

 

Levofloxacin (LEV) (131)

 

(15) 11%

 

(1) 1%

 

(115) 88%

 

Piperacillin (PRL) (91)

 

(32) 35%

 

(1) 1%

 

(58) 64%

Piperacillin-tazobactam (TZP) (115)

 

(37) 32%

 

(1) 1%

 

(77) 67%

 

Polymyxin B (PB) (88)

 

(69) 78 %

 

(6) 7%

 

(13) 15%

 

Table 7 Single versus polymicrobial growths

Organism isolated from 116 positive samples

150

Single growths

87

Polymicrobial growths

Number  29

Isolates 63

(i) Double growths

 

(ii) Triple growth

 

(iii) Four organisms

25

50

3

9

1

4

     

 

 

D:\xwu\Nano Biomedicine and Engineering\Articles for production\排版\11(2)\[4] NBE-2018-0085 In production 20190516\138-149\mbht8.jpg

Fig. 8 Isolates distribution according to wards. E. coli showed the highest prevalence in inpatients and lower in intensive care unit (ICU), followed by Pseudomonas showing 70% prevalence in inpatients and not present in ICU patients, and Proteus showing 64% prevalence in inpatients and 7% in ICU patients.

 

Table 8 Polymicrobial (double) growths according to location (n = 29)

Location

DG = IS

TG = IS

FO = IS

IPD

14 = 28

2 = 6

1 = 4

OPD

9 = 18

1 = 3

NIL

SICU

2 = 4

NIL

NIL

Total

25 = 50

03   =  09

1 = 4

Note: DG = double growth; IS = isolated; TG = triple growth; FO = four organisms; IPD = impatient department; OPD = outpatient department; SCIU = surgical intensive care unit.

 

Table 9 Details of polymicrobial growths according to patient location and ESBL production

Sr. no.

Isolate no.

Isolate

ESBL production

location

 

1

3

PA + KP

-+

IPD

2

4

E. coli + Pr spp.

+-

-

IPD

3

5

Pr spp. + PA

+-

IPD

4

6

PA + KP + E. coli

-++

 

+

IPD

5

8

PA+ KP

-+

 

+

IPD

6

12

E. coli + PA

+-

IPD

7

16

KP + Pr spp.

++

OPD

8

22

E. coli + PA

+-

IPD

9

23

Ab spp. + E.coli

--

IPD

10

28

E. coli + PA

--

IPD

11

32

PA + E. coli

 

 

E.coli

-+

 

+

IPD

12

38

E. coli + KP

-+

OPD

13

40

Ab spp. + PA

--

OPD

14

45

E. coli + KP

-+

OPD

15

55

E. coli + Ab spp.

+-

IPD

16

61

KP + E. coli

++

OPD

17

62

E. coli + KP + PA

 

-+-

IPD

18

69

E. coli + PA

+-

IPD

19

80

KP + Ab spp.

+-

IPD

20

84

KP + Pr spp.

++

IPD

21

96

KP + Pr spp. + Ab spp. + PA

 

+++-

OPD

22

97

PA + Ab spp. + KP

--+

OPD

23

100

Pr spp. + KP

--

SICU

24

101

Ab spp. + KP

++

SICU

25

104

KP + Pr spp.

+-

IPD

26

106

Ab spp. + E. coli

-+

OPD

27

111

KP + PA

+-

OPD

28

113

E. coli + KP

++

OPD

29

118

E. coli + KP

++

OPD

Notes: + = positive; - = negative; PA = Pseudomonas aeruginosa; Ab spp = Acinetobacter spp.; Pr spp. = Proteus spp., KP = Klebsiella pneumoniae; E. coli = Escherichia coli

 

D:\xwu\Nano Biomedicine and Engineering\Articles for production\排版\11(2)\[4] NBE-2018-0085 In production 20190516\138-149\mbht9.jpg

Fig. 9 Distribution of ESBL organisms in male and female. 64% male patients and 36% female patients were positive for ESBL.

 

Table 10 ESBL distribution according to gender (n = 74)

Gender

Number of  ESBL

Male

47 (64%)

Female

27 (36%)

Total

74 (100%)

 

D:\xwu\Nano Biomedicine and Engineering\Articles for production\排版\11(2)\[4] NBE-2018-0085 In production 20190516\138-149\mbht10.jpg

Fig. 10 Distribution of different micro-organisms that were ESBL producers. Klebsiella: 46%, E. coli: 42%, and Proteus: 8%. 

 

Table 11 ESBL positive isolates (n = 74)

Isolates

ESBL positive

Acinetobacter spp. (17)

2 (3%)

E. coli

31 (42%)

Klebsiella pneumoniae

34 (46%)

Pseudomonas aeruginosa

1 (1%)

Proteus spp.

6 (8%)

Total

74 (100%)

 

D:\xwu\Nano Biomedicine and Engineering\Articles for production\排版\11(2)\[4] NBE-2018-0085 In production 20190516\138-149\mbht11.jpg

Fig. 11 Polymicrobial growth in different clinical isolates according to patients’ locations in inpatient department, outdpatient department (OPD) and surgical intensive care unit (SICU).

 

Table 12 Distribution of ESBL according to patient location in surgical area

Wards

ESBL positive

Age (%)

IPD

42

57

OPD

29

39

SICU

3

4

Total

74

100

 

D:\xwu\Nano Biomedicine and Engineering\Articles for production\排版\11(2)\[4] NBE-2018-0085 In production 20190516\138-149\mbht12.jpg

Fig. 12 Antibiotic susceptibility pattern of different ESBL producers. Imipenem: 82%, amikacin: 55%, polymaxin B: 50%, piperacillin: 47%, cefoperazone-sulbactam: 46%, and cefepime: 3%.

 

Table 13 Effective antimicrobial in ESBL producers

Antibiotics

Frequency

Age

Sensitivity (%)

Amikacin

41

55

Cefoperazone-sulbactam

34

46

Cefepime

2

3

Imipenem

61

82

Piperacillin-tazobactam

35

47

Polymyxine B

37

50

 

Table 14 Antibiotic susceptibility of ESBL producers (n = 74)

Isolates

CAZ

AMC

CRO

AK

SCF

CIP

LEV

TZB

PRL

IPM

FEP

PB

S

S

S

S

S

S

S

S

S

S

S

S

Acinetobacter spp. (2)

0

0

0

1

0

0

0

0

1

2

1

0

E. coli (31)

0

0

0

26

21

1

1

17

7

25

3

9

Klebsiella pneumoniae

(34)

0

0

0

8

7

3

2

0

6

27

7

22

Pseudomonas aeruginosa

(1)

0

0

0

1

0

0

0

1

1

1

1

1

Proteus spp. (6)

0

0

0

6

4

0

1

4

0

6

0

0

Notes: S = sensitivity; AMC = amoxicillin-clavulanic acid; AK = amikacin; CAZ = ceftazidime; CRO = ceftriaxone; CIP = ciprofloxacin; FEP = faropenem; LEV = levofloxacin; PB = polymyxin B; SCF = spectinomycin; PRL = piperacillin; TZB = tazobactam.

 

Conclusions

In our set-up, 49% isolates were ESBL producers. The maximal number of patients was male (67%), and the maximal number of isolates was derived from inpatients (62%). In our study, the highest level of resistance was to amoxicillin/clavulanic acid, and the best sensitivity to ESBL producers was shown by imipenem. Imipenem is the drug of choice because it was sensitive to more than 80% E. coli strains.

 

Future recommendations include hand washing, never staying in hospital for extended period of time, removing catheter/needles as soon as possible, avoiding misuse and overuse of antibiotics, making policies for medication, and conducting seminars for awareness of staff and patients as well.

 

Conflict of Interests

The authors declare that no competing interest exists.

 

References

  1. N. Moremi, V.E. Manda, L. Falgenhauer, et al., Predominance of CTX-M-15 among ESBL producers from environment and fish gut from the shores of Lake Victoria in Mwanza, Tanzania. Front Microbiol., 2016, 7: 1862.
  2. J.T. Thaden, V.G. Fowler, D.J. Sexton, et al., Increasing incidence of extended-spectrum β-lactamase-producing Escherichia coli in community hospitals throughout the Southeastern United States. Medline, 2016, 37(1): 49-54.
  3. A.A dedeji, K. Vangala, and G. Saurina, Molecular epidemiology of Klebsiella pneumoniae with extended-spectrum ß-lactamase (ESBLs) in Brooklyn, NY. Proceedings of the 38th Annual Meeting of the Infectious Disease Society of America. New Orleans, USA, Sep. 2000: 7-10.
  4. M.A. Altayar, A.M. Thokra, and A.M. Mohammad, Extended spectrum β-lactamase -producing Escherchia coli in clinical isolates in Benghazi, Libiya: Phenotypic detection and antimicrobial susceptibility pattern. Medical Journal of Islamic World Academy of Sciences, 2012: 49-56.
  5. A.R. Anvikar, A. Deshmukh, R.P. Karyakarte, et al., One year prospective study of 3280 surgical wounds. Indian Journal of Medical Microbiology, 1999, 17: 129-132.
  6. A. Poulou, E. Grivakou, Modified CLSI extended-spectrum β-lactamase (ESBL) confirmatory test phenotypic detection ESBLs among Enterobacteriaceae producing various β-lactamases. Journal of Clinical Microbiology, 2014, 52(5): 1483-1489.
  7. B. Blomberg, D.S. Mwakagile, W.K. Urassa, et al., Surveillance of antimicrobial resistance at a tertiary hospital in Tanzania. BMC Public Health, 2004, 4: 45.
  8. A.E. Brown. Benson’s microbiological applications: Laboratory manual in general microbiology, 9th ed. McGraw Hill, USA. 2000: 259-260.
  9. P.A. Bradford. Extended spectrum of ß-lactamases in the 21-century: Characterization, epidemiology, and detection of this important resistant threat. Clinic.Microbiol.Rev., 2001, 14(4): 933-951.
  10. K. Bush. New beta lactamases in Gram-negative bacteria: Diversity and impact and selection of antimicrobial therapy. J. Clin. Infect Dis., 2001, 32: 1085-1089.
  11. U. Chaudhary, R. Aggarwal. Extended spectrum β-lactamases (ESBL) - an emerging threat to clinical therapeutics. Indian J Med Microbial, 2004, 22(2): 75-80.
  12. M. Cheesbrough. Biochemical tests to identify bacteria. District laboratory practice in tropical countries. Cambridge University Press, UK, 2000: 63-78.
  13. P.A. Wayne, Performance standards for antimicrobial susceptibility testing; sixteen informational supplement, M.M 1oo-S22, volume 32 number 3. Clinical and Laboratory Standards Institute, 2011.
  14. R. Colodner, W. Rock, B. Chazan, et al., Risk factor for the development of extended spectrum β-lactamases producing bacteria in non-hospitalized patients. European Journal of Clinical Microbiology and Infectious Diseases, 2004, 23: 163-167.
  15. D.J. Diekema, H.S. Sader, K. Kugler, et al., Survey of bloodstream infections due to gram-negative bacilli: frequency of occurrence and antimicrobial susceptibility of isolates collected in the United States, Canada, and Latin America for the SENTRY antimicrobial surveillance program. Clin. Infect. Dis., 1999, 29: 595-607.
  16. A.Ghosh, P.S. Karmakar, J. Pal, et al., Bacterial incidence and antibiotic sensitivity pattern in moderate and severe infections in hospitalised patients. J Indian Med Assoc, 2009, 107(1): 21-22, 24-25.
  17. D. Gould, A. Chamberlain, Gram-negative bacteria. The challenge of preventing cross-infection in hospital wards: a review of the literature. J Clin Nurs, 1994, 3: 339-345.
  18. J. Harley, L. Prescott, Laboratory exercises in microbiology. Wm. C. Brown Publishers, 1990: 49-53.
  19. P.S. Hawser, E.R. Badal, K.S. Bouchillon, et al., Antibiotic susceptibility of intra-abdominal infection Isolates from Indian hospitals during 2008. Journal of Medical Microbiology, 2010, 59: 1050-1054.
  20. A.E. Inkhorn, M.M. Neugauser, D.T. Bearden, et al., Extended spectrum beta lactamases: Frequency, risk factors and outcomes. Pharmacotherapy, 2002, 22: 14-20.
  21. K. Jabeen, A. Zafar, and R. Hassan, Frequency and sensitivity pattern of extended spectrum beta lactamase producing isolates in a tertiary care hospital laboratory of Pakistan. J Pak Med Assoc, 2005, 55(10).
  22. A.A. Kader, K.A. Kumar, Prevalence of extended spectrum β-lactamase among multidrug resistant gram-negative isolates from a general hospital in Saudi Arabia. Saudi Med J, 2004, 25(5): 570-574.
  23. C. Kliebe, B.A. Nies, J.F. Meyer, et al., Evolution of plasmid-coded resistance to broadspectrum cephalosporins. Antimicrobial Agent Chemotherapy, 1995, 28: 302-307.
  24. E.W. Koneman, S.D. Allen, W.M. Jnda, et al. (Eds), Antimicrobial susceptibility testing in color atlas and textbook of diagnostic microbiology, 5th ed. Lippincott, Philadelphia, 1997: 785-856.
  25. E.F. Lyamuya, S.J. Moyo, E.V. Komba, et al., Prevalence, antimicrobial resistance and associated risk factors for bacteriuria in diabetic women in Dar es Salaam, Tanzania. African Journal of Microbiology Research, 2011, 5: 683-689.
  26. S. Malik, A. Gupta, K.P. Singh, et al., Isolates from post-operative wound infections at a tertiary care hospital in India. J Infect Dis Antimicrob Agents, 2011, 28: 45-51.
  27. J.H. Stein, Hospital infection control, internal medicine, 5th ed. 1998.
  28. P.  Mathur, A. Kapil, B. Das, et al., Prevalence of extended spectrum β-lactamase producing gram negative bacteria in a tertiary care hospital. Indian J Med Res, 2002, 115: 153-157.
  29. B. Mawalla, E.S. Mshana, L.P. Chalya, et al., Predictors of surgical site infections among patients undergoing major surgery at Bugando Medical Centre in Northwestern Tanzania. BMC Surgery, 2011, 11: 21.
  30. S.E. Moland, J.A. Black, J. Ourada, et al., Occurrence of newer ß-lactamases in Klebsiella pneumoniae isolates from 24 U.S. hospitals. Antimicrob Agents Chemother, 2002, 46: 3837-3842.
  31. B.O. Motayo, J.A. Akinbo, I.J. Ogiogwa, et al., Bacteria colonisation and antibiotic susceptibility pattern of wound infections in a hospital in Abeokuta. Frontiers in Science, 2013, 3(1): 43-48.
  32. H.  Mousa, Aerobic, anaerobic and fungal burn wound infections. J Hosp Infect, 1997, 37: 317-323.
  33. S. Moyo, S. Aboud, M. Kasubi, et al., Bacteria isolated from bloodstream infections at a tertiary hospital in Dar es Salaam, Tanzania - antimicrobial resistance of isolates. S Afr Med J, 2010, 100: 835-838.
  34. S. Nathisuwan, S. Burgess, and J.S. Lewis. Extended-spectrum ß-lactamases: Epidemiology, detection and treatment. Pharmacotherapy, 2001, 21: 920-928.
  35. M.A. Omari, I.M. Malonzo, J.J. Bwayo, et al., Pattern of bacterial infection and antimicrobial susceptibility at Kenyatta National Hospital, Nairobi, Kenya. East Afr Med J, 1997, 74(3): 134-137.
  36. M.F. Owings, J.L. Kozak, Ambulatory and Inpatient Procedures in the United States. Vital Health Statistics 139, 1996, 1998 1-119.
  37. D.L. Paterson, The epidemiological profile of infections with multidrug resistant Pseudomonas aeruginosa and Acinetobacter species. Clin Infect Dis, 2006, 43: S43-S48.
  38. C.C. Sanders, W.E. Jr. Sanders, Beta lactam resistance in gram negative bacteria: Global trends and clinical impact. Clin Infect Dis, 1992, 15: 824- 883.
  39. R.K. Sanjay, N.M.N. Prasad, and V.S.G. Kumar, A study on isolation and detection of drug resistance gram negative bacilli with special importance to post-operative wound infection. J. Microbiol. Antimicrob., 2010, 2(6): 68-75.
  40. A.Shriyan, R. Sheetal, and N. Nayak, Aerobic micro-organisms in post-operative wound infections and their antimicrobial susceptibility patterns. Journal of Clinical and Diagnostic Research, 2010, 4: 3392-3396.
  41. I. Shukia, R. Tiwari, and M. Agraval, Prevalence of extended spectrum â-lactamase producing Klebsiella pneumoniae in a tertiary care hospital. Indian J of Med Microbiol, 2004, 22: 87-91.
  42. S. Singhal, T. Mathur, S.  Khan, et al., Evaluation of methods for AmpC beta-lactamase in gram negative clinical isolates fromtertiary care hospitals. Indian J Med Microbiol, 2005, 23: 120-124.
  43. W.K. Urassa, G. Kagoma, amd N. Lungeland, Antimicrobial susceptibilty of Staphylococcus aureus strain at Muhimbili Medical Centre. Tanzania.East Afr Med J, 1999, 76(12): 693-695.
  44. G. Zaman, A.K. Karamat, A.S. Abbasi, et al., Prevalence of extended spectrum beta lactamase producing Enterobacteriaceae in nosocomial isolates. Pak Armed Forces Med J, 1999, 49: 91-96

 

Copyright© Muhammad Bilal Habib, Noreen Sher Akbar. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

Nano Biomedicine and Engineering.

Copyright © Shanghai Jiao Tong University Press